PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0010322.1_g000015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | C2H2 | ||||||||
Protein Properties | Length: 164aa MW: 18213 Da PI: 10.0672 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.9 | 0.00067 | 42 | 64 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ Fs+ L H +H Rmu_sc0010322.1_g000015.1 42 FVCKTCNREFSSFQALGGHRASH 64 89**********99999998887 PP | |||||||
2 | zf-C2H2 | 11.9 | 0.00068 | 87 | 109 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C + F L H+r+H Rmu_sc0010322.1_g000015.1 87 HECPICRMEFAVGQALGGHMRRH 109 79********************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 164 aa Download sequence |
MKRGREDDQQ TLDLINCLML LSKVDQNDSS SIKKQKISDR VFVCKTCNRE FSSFQALGGH 60 RASHKKPSGA DQLQLAQPSS PAKPKKHECP ICRMEFAVGQ ALGGHMRRHR DVMSSAAERI 120 RAAAVPVLKK SNSSKRVSCL NLDLNLAPPG YPHLYDLTEL QLTS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 3e-38 | C2H2 family protein |