PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0010191.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 163aa MW: 18434.4 Da PI: 10.2372 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 30.5 | 6e-10 | 57 | 111 | 9 | 57 |
HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 9 keqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 ++ +++L+el+ + r p+ae+++++ +l +++ + +++WF N+ a+e++ Rmu_sc0010191.1_g000004.1 57 SNLIRILKELYCNkgVRSPTAEQIQRICLQLkrygKIESKYIFYWFGNHMARERQ 111 66789******86679*************************************96 PP | |||||||
2 | Wus_type_Homeobox | 75.8 | 6.3e-25 | 55 | 113 | 8 | 65 |
Wus_type_Homeobox 8 PtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 P ++ i+iL+ely +G+r+P++e+iqri +L++yGkie+k +fyWF N+ aRerqk+ Rmu_sc0010191.1_g000004.1 55 PASNLIRILKELYCnKGVRSPTAEQIQRICLQLKRYGKIESKYIFYWFGNHMARERQKK 113 88999********669*****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MRILLFLGGS FAMCIAASIC LVRWLSVENT IAAEEAQANS MNLWLFMKKW AATWPASNLI 60 RILKELYCNK GVRSPTAEQI QRICLQLKRY GKIESKYIFY WFGNHMARER QKKRFTSDVH 120 VPMQRSGLIG NGNGTNWKPE DQYINFGSSA SASASSAGVI AFN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 3e-23 | WOX family protein |