PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0010132.1_g000030.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 225aa    MW: 24779 Da    PI: 6.1556
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0010132.1_g000030.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding27.86.1e-098332148
                               TT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
            Myb_DNA-binding 21 ggtWktIartmgkgRtlkqcksrwqkyl 48
                                + W++Ia+ ++ +Rt++++k++w+++l
  Rmu_sc0010132.1_g000030.1  8 CR-WSAIAAQLP-KRTDNEIKNYWNTHL 33
                               45.*********.************996 PP
Sequence ? help Back to Top
Protein Sequence    Length: 225 aa     Download sequence    
MEIGMYKCRW SAIAAQLPKR TDNEIKNYWN THLKKRLAKI GFDPVTHKPK TAILASAEGC  60
DPKNLSNLSH IAQWETARLQ AEARFSRPSK LLISHDQPPR FGPVPVPQCL DMNARAREIQ  120
LLLKSILAAD SGAATHVGPE VASFGTVDVE GVLTNCDQFE APRTSTSVLG FDEVFGESGT  180
NNDYGELLEA LLQHNHNSTG FEVGDAWSLE QRATVMMSEP GTTYI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.11e-34MYB family protein