PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0009474.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | G2-like | ||||||||
Protein Properties | Length: 296aa MW: 33206.3 Da PI: 9.9865 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 100.7 | 9.5e-32 | 77 | 130 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 rlrWtp+LH +F++ave+LGG+e+AtPk +l+lm+vkgL+++hvkSHLQ+YR+ Rmu_sc0009474.1_g000002.1 77 SRLRWTPDLHLCFIHAVERLGGQERATPKLVLQLMNVKGLSIAHVKSHLQMYRS 130 69***************************************************7 PP | |||||||
2 | Myb_DNA-binding | 51.2 | 2.9e-16 | 78 | 129 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+++++ +++av++lGg t+k++ + m+ kg++ ++ks++q+y+ Rmu_sc0009474.1_g000002.1 78 RLRWTPDLHLCFIHAVERLGGQeraTPKLVLQLMNvKGLSIAHVKSHLQMYR 129 89************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 296 aa Download sequence |
MKISSEGTSQ ASKASLSSSS QSKKERGDDE EVVDKDSQQQ PSSKNGVSSS SSTIEENEKS 60 KGASGGSVRP YVRSKTSRLR WTPDLHLCFI HAVERLGGQE RATPKLVLQL MNVKGLSIAH 120 VKSHLQMYRS KKMEDPNQVL SEQGFYIEGG DNHIYNLTQL SVLQSFNHQW PSSGLRYGAD 180 ASWHGRHDDH HHQIYSPYSN TGRTQLFDHH NTRVTGLHGS VAERIFGSNN TSTTVLRPQE 240 PVYGCQRRTR LEELVVMLMR ILYVIVSNAI NTVMMVKMIR SSTIFSFHVS TGRFKA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40260.1 | 8e-49 | G2-like family protein |