PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0009101.1_g000014.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Protein Properties

Length: 848aa MW: 94405.9 Da PI: 5.634

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0009101.1_g000014.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72.8	4.1e-23	179	280	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegD 78 f+k+lt sd++++g +++p++ ae+ +++++ ++l+ +d++ +W++++i+r++++r++lt+GW+ Fv+a++L +gD Rmu_sc0009101.1_g000014.1 179 FCKTLTASDTSTHGGFSVPRRAAEKVfppldfSLQPPA-QELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGD 261 99***************************9777666.49*************************************** PP EEEEEE-SSSEE..EEEEE-S CS B3 79 fvvFkldgrsefelvvkvfrk 99 +v+F ++++ +l+++++r+ Rmu_sc0009101.1_g000014.1 262 SVLFI--WNEKNQLLLGIRRA 280 *..8899999**997 PP

Sequence ? help Back to Top
Protein Sequence Length: 848 aa Download sequence
MVLRREGFPP FGASIWIWNN LNFVEYDDGG IVSKKLIERK AKLIDIDMKL STSGFGRQDQ 60 EGGGGGAEKK CLNSELWHAC AGPLVSLPTS GSRVVYFPQG HSDQVAATTN KQVDAHIPNY 120 PALPPQLICQ LHNVTMHADV ETDEVYAQMT LQPLTPQEQK ETFLPMELGI PSKQPTNYFC 180 KTLTASDTST HGGFSVPRRA AEKVFPPLDF SLQPPAQELI ARDLHDVEWK FRHIFRGQPK 240 RHLLTTGWSV FVSAKRLVAG DSVLFIWNEK NQLLLGIRRA TRPQTVMPSS VLSSDSMHIG 300 LLAAAAHASS TNSWLVHLSL SYRAATWFGN YQTDRIPTDI LSLVGWDEST AGERQPRVSL 360 WEIEPLTTFP MYPSLFPLRL KRPWHPGASS MHDNRDEAAN SLMWLRGGTG EQGLQSMNFQ 420 AVGMFPWMQQ RLDSTFMGND PSQQYQAMLA AGLQNIGSGD QLRQHVMHFQ QPLQYLQQPG 480 SHNPLLQLQQ QVIPQSVPHN MLQAQPQVSM ENLPQQLLPP QFNNQTEEEP QQQHNTYHDA 540 RKVQREQLHQ SQQMNLPSPS FSKTDFADSS TKLSGSTTSR QNTLGSLCPE GNNNLLNISR 600 AGHSLPAEQL PQQSWAPKFA YAQANDFANP LSFTPFDEKD NAVEQENCNS DSQNPTLFGV 660 NIESSGLVFP TTVPNFATSS NDADMPMPLG DSGFQSSLYG CMQGSSELLH GAGQVDPPTP 720 NCTFVKVYKS GSVGRSLDIS RFSSYNQLRE ELAQMFGIEG KLEDCLRSGW QLVFVDREND 780 VLLLGDDPWE SFVNNVWYIK ILSPEDVHKM GDQAVESFSP NVGQRLNSSG NETQDHISGL 840 PSLGSLEY

Sequence ? help Back to Top

Protein Sequence Length: 848 aa Download sequence

MVLRREGFPP FGASIWIWNN LNFVEYDDGG IVSKKLIERK AKLIDIDMKL STSGFGRQDQ  60
EGGGGGAEKK CLNSELWHAC AGPLVSLPTS GSRVVYFPQG HSDQVAATTN KQVDAHIPNY  120
PALPPQLICQ LHNVTMHADV ETDEVYAQMT LQPLTPQEQK ETFLPMELGI PSKQPTNYFC  180
KTLTASDTST HGGFSVPRRA AEKVFPPLDF SLQPPAQELI ARDLHDVEWK FRHIFRGQPK  240
RHLLTTGWSV FVSAKRLVAG DSVLFIWNEK NQLLLGIRRA TRPQTVMPSS VLSSDSMHIG  300
LLAAAAHASS TNSWLVHLSL SYRAATWFGN YQTDRIPTDI LSLVGWDEST AGERQPRVSL  360
WEIEPLTTFP MYPSLFPLRL KRPWHPGASS MHDNRDEAAN SLMWLRGGTG EQGLQSMNFQ  420
AVGMFPWMQQ RLDSTFMGND PSQQYQAMLA AGLQNIGSGD QLRQHVMHFQ QPLQYLQQPG  480
SHNPLLQLQQ QVIPQSVPHN MLQAQPQVSM ENLPQQLLPP QFNNQTEEEP QQQHNTYHDA  540
RKVQREQLHQ SQQMNLPSPS FSKTDFADSS TKLSGSTTSR QNTLGSLCPE GNNNLLNISR  600
AGHSLPAEQL PQQSWAPKFA YAQANDFANP LSFTPFDEKD NAVEQENCNS DSQNPTLFGV  660
NIESSGLVFP TTVPNFATSS NDADMPMPLG DSGFQSSLYG CMQGSSELLH GAGQVDPPTP  720
NCTFVKVYKS GSVGRSLDIS RFSSYNQLRE ELAQMFGIEG KLEDCLRSGW QLVFVDREND  780
VLLLGDDPWE SFVNNVWYIK ILSPEDVHKM GDQAVESFSP NVGQRLNSSG NETQDHISGL  840
PSLGSLEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G37020.1	0.0	ARF family protein