PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0008698.1_g000010.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 191aa MW: 21428.8 Da PI: 9.6678 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 98.1 | 1.6e-30 | 130 | 190 | 2 | 62 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikel 62 + +kdrhsk++T +g+RdR++Rl+a++a++f+d+qd+LG+d++sk ++WL+++ak+ai el Rmu_sc0008698.1_g000010.1 130 TDRKDRHSKVCTTKGPRDRSIRLVAHTAIQFYDMQDRLGYDQPSKVVDWLIKKAKAAINEL 190 679*******************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 191 aa Download sequence |
MSSISRYSLY ASLCPQAETI VRSKMAWIYG QQRNVSAQLL RLFFHDCFIE IQILLLVRFL 60 PPIADQTPPL RLNPPSCTID VSGSPNFKSY SKLKLCIKAS PLTPSSSSPT ASSSTASEIV 120 EAQCHILRAT DRKDRHSKVC TTKGPRDRSI RLVAHTAIQF YDMQDRLGYD QPSKVVDWLI 180 KKAKAAINEL D |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31070.1 | 1e-35 | TCP family protein |