PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0008698.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

WOX

Protein Properties

Length: 384aa MW: 43299.9 Da PI: 5.664

Description

WOX family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0008698.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	19.5	1.6e-06	257	294	24	57
S--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 24 ypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 p+ e+++++ +l +++ ++V++WF N+Ra+ek+ Rmu_sc0008698.1_g000003.1 257 SPTIEQIQRIWLQLkwygKIEFKNVYFWFVNQRAREKR 294 599**********************************7 PP
2	Wus_type_Homeobox	49.1	1.4e-16	253	296	22	65
Wus_type_Homeobox 22 sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +Gl +P+ e+iqri +L+ yGkie kNV++WF N++aRe++k+ Rmu_sc0008698.1_g000003.1 253 KGLWSPTIEQIQRIWLQLKWYGKIEFKNVYFWFVNQRAREKRKK 296 6899**************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MRVLEVTPPS AVDEAKMVLH EHLGPQVLET DILSRVLEAL RYLCQEKALT QQQFSAIDDL 60 LNELGEARQR QPAANAQAHD TREALNSLSR EMDISRGILN ERTNRLRELQ IQRSDFKLRI 120 EDLHTGLAFV ENAIATEEAQ LDELLAASEE MGRNLAHLRE RATQAEASAI AANLRVEELC 180 LKLSFMGQSL LQIGLETRGG SKCGISGHVR SFFEKIPYAE RNGEREDGHS EVHLSSSVSF 240 LLDLARVVPS RWKGLWSPTI EQIQRIWLQL KWYGKIEFKN VYFWFVNQRA REKRKKRSTL 300 DVHVPMQRSG LVGDDNGTNW KPEDQYINLE SSASASASSA GVIAFNGQMG NYGGYGSMNM 360 EIETLPLFPM HGEDIFGNMK TTSD

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MRVLEVTPPS AVDEAKMVLH EHLGPQVLET DILSRVLEAL RYLCQEKALT QQQFSAIDDL  60
LNELGEARQR QPAANAQAHD TREALNSLSR EMDISRGILN ERTNRLRELQ IQRSDFKLRI  120
EDLHTGLAFV ENAIATEEAQ LDELLAASEE MGRNLAHLRE RATQAEASAI AANLRVEELC  180
LKLSFMGQSL LQIGLETRGG SKCGISGHVR SFFEKIPYAE RNGEREDGHS EVHLSSSVSF  240
LLDLARVVPS RWKGLWSPTI EQIQRIWLQL KWYGKIEFKN VYFWFVNQRA REKRKKRSTL  300
DVHVPMQRSG LVGDDNGTNW KPEDQYINLE SSASASASSA GVIAFNGQMG NYGGYGSMNM  360
EIETLPLFPM HGEDIFGNMK TTSD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G11260.1	2e-12	WOX family protein