PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0008668.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

SBP

Protein Properties

Length: 381aa MW: 41761.6 Da PI: 8.2077

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0008668.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	74.3	2e-23	177	228	1	52
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEET CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhel 52 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsr + Rmu_sc0008668.1_g000004.1 177 RCQAEGCHADLSQAKHYHRRHKVCEFHSKASTVIANGLTQRFCQQCSRLSHT 228 6***********************************************8655 PP

Sequence ? help Back to Top
Protein Sequence Length: 381 aa Download sequence
MLDYEWANPS SVMLDESESV NGSDPNRHLH HHNSILDHYS TTQAAFNNLL PPQPHQQQQQ 60 QSAGSAFAHH FNQAQAQAHQ VHSLFDPSVF ASASSYAPTS AHHHHHHSVL TLDPSIPGHH 120 GLVLIPKSED VCPPADFATR IGLNLGGRTY FSSEDDFMNR LYRRSRPADH GPLNSPRCQA 180 EGCHADLSQA KHYHRRHKVC EFHSKASTVI ANGLTQRFCQ QCSRLSHTRN YRRTLPPVTL 240 SPSQNDANVL GYAISQPANS RPLTHNLRAF ESVYAPHCSA YSAGKLSLST AVVDENACGI 300 ETMLCMPMIG SSLPEEIGRS QPSPAKNSAT KSRKPQLSTA AGKYPEFILR QCYKVSGGIS 360 RSFVFGCDCG RVAAANGVGL F

Sequence ? help Back to Top

Protein Sequence Length: 381 aa Download sequence

MLDYEWANPS SVMLDESESV NGSDPNRHLH HHNSILDHYS TTQAAFNNLL PPQPHQQQQQ  60
QSAGSAFAHH FNQAQAQAHQ VHSLFDPSVF ASASSYAPTS AHHHHHHSVL TLDPSIPGHH  120
GLVLIPKSED VCPPADFATR IGLNLGGRTY FSSEDDFMNR LYRRSRPADH GPLNSPRCQA  180
EGCHADLSQA KHYHRRHKVC EFHSKASTVI ANGLTQRFCQ QCSRLSHTRN YRRTLPPVTL  240
SPSQNDANVL GYAISQPANS RPLTHNLRAF ESVYAPHCSA YSAGKLSLST AVVDENACGI  300
ETMLCMPMIG SSLPEEIGRS QPSPAKNSAT KSRKPQLSTA AGKYPEFILR QCYKVSGGIS  360
RSFVFGCDCG RVAAANGVGL F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.2	8e-46	SBP family protein