PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008529.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 254aa    MW: 27610.9 Da    PI: 5.7559
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008529.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.83.6e-2095146156
                        AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                                s+y+GVr+++  g+W+AeIrdp+    r  r++lg+f taeeAa+a++ a+ +++ge
  Rmu_sc0008529.1_g000003.1  95 SKYRGVRQRP-GGKWAAEIRDPR----RaVRVWLGTFQTAEEAARAYDTAAIEFRGE 146
                                89********.9*********82....48*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 254 aa     Download sequence    
MPSHSGGLPK EQEHAIIVSA LKQVVRGRTT QPPPPQLHYA SSSLPPTGGT DQVVIPFSDC  60
DTCQVCNMKM DDCLGCGLFR PSEQDEGKGK KMKTSKYRGV RQRPGGKWAA EIRDPRRAVR  120
VWLGTFQTAE EAARAYDTAA IEFRGERAKL NFPLSSEAGT TTTGAALTRQ SMETGEVNQV  180
TASSVKSANQ EEGQSSDVKD EDIDRFIWEM LKNDDGDEDL STRQMGGNDA DRVGSGMPLF  240
PLGKVPGQNL LLGH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-27ERF family protein