PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0008475.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 112aa    MW: 13438.1 Da    PI: 10.1367
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0008475.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding22.82.1e-073170445
                               S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
            Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                               ++++E++l+ +  k+ G + W +Ia +++ gR ++++  +w+
  Rmu_sc0008475.1_g000001.1 31 MSEQEEDLICRMYKLVGDR-WGLIAGRLP-GRKAEEIERFWL 70
                               799**************99.*********.***********7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 112 aa     Download sequence    
MDVKRRRKQA KTSSSSFSEE VSSIEWEFIN MSEQEEDLIC RMYKLVGDRW GLIAGRLPGR  60
KAEEIERFWL MRHGEVFASR RRTEQEKYQQ PQELNNSNNM NKSTKNSRRY NS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G53200.16e-28MYB_related family protein