PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Rmu_sc0008079.1_g000011.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 178aa MW: 21120.2 Da PI: 7.0522 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 30.4 | 1.1e-09 | 10 | 98 | 1 | 84 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk....kvkaeekewyfFskrdkkyatgkrknratks 80 l pG rF P ++elv +yLk+ ++g+k++ ++ + ++d+y + ePw++ k k++a e++ +++++ + + ++r+ ks Rmu_sc0008079.1_g000011.1 10 LLPGERFCPMEDELVLFYLKPMLNGEKVPGRNFvVFDCDLYGHqEPWEIWKtrrpKLEA-EQRPLLLHPTQEDEFHRLTSKRTQKS 94 579************************99988769999***8879****6334333333.23346777777777777777776666 PP NAM 81 gyWk 84 W+ Rmu_sc0008079.1_g000011.1 95 WNWH 98 5665 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 178 aa Download sequence |
MEESSQGHHL LPGERFCPME DELVLFYLKP MLNGEKVPGR NFVVFDCDLY GHQEPWEIWK 60 TRRPKLEAEQ RPLLLHPTQE DEFHRLTSKR TQKSWNWHLE WRRLWQASEI FGDRSCGWLK 120 EKVFLQECSF CAPRPTKAVE WCEGCETLGR GDEIAGGTCM VGLFKRRENC FLYQRARA |