PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007899.1_g000001.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

Dof

Protein Properties

Length: 299aa MW: 32280.6 Da PI: 9.6864

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007899.1_g000001.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122	2.1e-38	33	93	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 +++ +kcprC+s ntkfCyynnyslsqPryfCkaCrryWt+GG+lrnvPvGgg+rk k+++ Rmu_sc0007899.1_g000001.1 33 HHEPQKCPRCESLNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNVPVGGGCRKGKRAK 93 57889***************************************************99875 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MQGERDQQQQ NNQDRKVNQQ QQQGQQQPQQ QQHHEPQKCP RCESLNTKFC YYNNYSLSQP 60 RYFCKACRRY WTQGGTLRNV PVGGGCRKGK RAKTMSSSSS ATSSRSVLQP QPQPQPQPQD 120 HHQLQQRSLM MSTGPAALNS LAGSQYYPGG TGYLTSMPFA QSLNHLGGSG QLGSGGGASN 180 LGLLHGFNAI SSYGQRQMQS HLFKGNMEPP PLYPSEDHRG LLLQPARPSG SMTDWPESFI 240 NKSHASVSAS AAAASAGQSA LWSTTMGHNT STTSGAGPSL NSAQWPDDIA GSFAAGPPQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60200.1	1e-29	Dof family protein