PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007843.1_g000003.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 320aa MW: 35116.4 Da PI: 4.2987

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007843.1_g000003.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	29.8	1.3e-09	157	199	4	46
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 +k+ rr +N+ AA rsR+R+k+++ Le k+k Le+e ++L Rmu_sc0007843.1_g000003.1 157 SKKRRRQLRNKDAAMRSRERRKMYVTDLEMKSKYLEGECRRLG 199 6999**********************************98664 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MEFDGGLECL DSGVDVIGEI DWDFVFDDAK GLDLLQELEN PAATAATGAS PSSSSSSTVE 60 DAPANPETGS IDTWIGEVED MLMKDDDVSK VEASEEPPKE YYENFLADVL VDSPSTESPA 120 DVDSNSNGCA ESEKEKTDGS PLNNDTDADA DADDPVSKKR RRQLRNKDAA MRSRERRKMY 180 VTDLEMKSKY LEGECRRLGR LLQCCYAENN ALRLSLQMGN AFGCGVSGTK QESAVLLELL 240 LLGSLLWFLD LTCLFTLPLM PHLLLLTLNQ EQANKALESV GPRARGEASK VVLALQSQSF 300 VKTRRCKASR TKMKYAFLVS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	159	189	KRRRQLRNKDAAMRSRERRKMYVTDLEMKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	7e-13	bZIP family protein