PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007801.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family WOX
Protein Properties Length: 193aa    MW: 21546.1 Da    PI: 9.8786
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007801.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox53.93e-173090256
                               T--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS
                   Homeobox  2 rkRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56
                                +R+ +t++q+++L+el+     + p+ e+ ++++ +l    +++ ++V++WFqN+Ra+ek
  Rmu_sc0007801.1_g000003.1 30 NTRWLPTRDQIRILKELYDDkgVKSPTIEQVQRITLQLkwygEIENKNVFYWFQNQRAREK 90
                               58*****************6579*************************************9 PP
2Wus_type_Homeobox94.87.7e-312992264
          Wus_type_Homeobox  2 artRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                               ++tRW Pt +Qi+iL+ely+ +G+++P+ e++qrit +L+ yG+ie+kNVfyWFQN++aRe+ k
  Rmu_sc0007801.1_g000003.1 29 SNTRWLPTRDQIRILKELYDdKGVKSPTIEQVQRITLQLKWYGEIENKNVFYWFQNQRAREKLK 92
                               789****************999***************************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
MEPQNRHPTK DGGSNKATES SPNMHCTQSN TRWLPTRDQI RILKELYDDK GVKSPTIEQV  60
QRITLQLKWY GEIENKNVFY WFQNQRAREK LKNNNLTSDV QVPKQRSGLV SGSNNLNFGS  120
TSSAGVGGSI MEQRGDDHQE IKTLPLFPMH SEDIFGNMKT TSDGGGGHGG GSYISLELSL  180
SCKGKARKSF RSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17950.13e-25WOX family protein