PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0007784.1_g000006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 96aa MW: 10824.4 Da PI: 6.5097 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 29.4 | 2.3e-09 | 5 | 46 | 1 | 40 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee.v.ikevdiy 40 +p+G+rFhPtdeel+ +yL k ++ +++ ++e+d+y Rmu_sc0007784.1_g000006.1 5 VPVGVRFHPTDEELIEHYLYLKNNHGLASATPsLlLPEFDLY 46 599****************99987765333221236666666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 96 aa Download sequence |
MDHYVPVGVR FHPTDEELIE HYLYLKNNHG LASATPSLLL PEFDLYGGES VEALEASSEI 60 FSGRGRTVYK TFRMSCIVFR ALASKGMLND IKKASW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G14000.1 | 6e-09 | NAC family protein |