PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007784.1_g000005.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 434aa MW: 47332.5 Da PI: 4.983

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007784.1_g000005.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	30.4	8.6e-10	158	199	4	45
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 +k+ rr +N+ AA rsR+R+k+++ Le k+k Le+e ++L Rmu_sc0007784.1_g000005.1 158 SKKRRRQLRNKDAAMRSRERRKMYVTDLEMKSKYLEGECRRL 199 6999********************************997765 PP

Sequence ? help Back to Top
Protein Sequence Length: 434 aa Download sequence
MEFDGGLEFL DSGVDVIGEI DWDFVFDDAK GLDLLQELEN PAATAATGAS PSSSSSSSTV 60 EDAPANPETG SIDTWIGEVE DMLMKDDDVS KVEASEEPPK EYYENFLADV LVDSPSTESP 120 ADVDSNSNGC AESEKEKTDG SPLNNDTDAD ADADDPVSKK RRRQLRNKDA AMRSRERRKM 180 YVTDLEMKSK YLEGECRRLG PGVCCALGTP AVGFPALVPG PHVPIHPASN APPTTTNSKS 240 RAGKQSSRKC GSKSKRGSNL QIPGTTATHL EVFTSMSSEP ARIDLNRPPE ETKPTSQEGS 300 EISCLVSIPM AAAPRDIRCR GCRCRRRKEW EMIKGLVWDL RPDGFPVGLR RPNLYDANSK 360 TRGLAADHQI QQYYDTFQGI ANYPPPQPPS EPVVGFPTPV PPLGSSGRPP LPPQRHHHHH 420 HQGYQTVTGN DLNR

Sequence ? help Back to Top

Protein Sequence Length: 434 aa Download sequence

MEFDGGLEFL DSGVDVIGEI DWDFVFDDAK GLDLLQELEN PAATAATGAS PSSSSSSSTV  60
EDAPANPETG SIDTWIGEVE DMLMKDDDVS KVEASEEPPK EYYENFLADV LVDSPSTESP  120
ADVDSNSNGC AESEKEKTDG SPLNNDTDAD ADADDPVSKK RRRQLRNKDA AMRSRERRKM  180
YVTDLEMKSK YLEGECRRLG PGVCCALGTP AVGFPALVPG PHVPIHPASN APPTTTNSKS  240
RAGKQSSRKC GSKSKRGSNL QIPGTTATHL EVFTSMSSEP ARIDLNRPPE ETKPTSQEGS  300
EISCLVSIPM AAAPRDIRCR GCRCRRRKEW EMIKGLVWDL RPDGFPVGLR RPNLYDANSK  360
TRGLAADHQI QQYYDTFQGI ANYPPPQPPS EPVVGFPTPV PPLGSSGRPP LPPQRHHHHH  420
HQGYQTVTGN DLNR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	160	190	KRRRQLRNKDAAMRSRERRKMYVTDLEMKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G42990.1	4e-13	bZIP family protein