PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0007782.1_g000001.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 323aa    MW: 37579.4 Da    PI: 4.7134
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0007782.1_g000001.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM768.9e-24101501128
                        NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiy.kvePwdLpk.....kvka....eekewyfFskrdkkyatgkr 73 
                                l pG rF P ++el+++yLk+kv+g++++ +e+ i e+d+y + ePw++ +     +  a    ++k++yfF+k++k +a+ +r
  Rmu_sc0007782.1_g000001.1  10 LLPGQRFCPMEDELLMYYLKPKVNGEEVPGKEAlICELDLYgEQEPWNIWEryaarR--AndlrRNKDLYFFTKKKKVSAKASR 91 
                                579************************9998888******93469****74344442..1345466689*************** PP

                        NAM  74 knratksgyWkatgkdkevlskkgel......vglkktLvfykgrapkgektdWvmheyrl 128
                                 +r++ sg Wk +   ke++  ++++       g kkt ++ +  +++ ++ +W+m e++l
  Rmu_sc0007782.1_g000001.1  92 ISRKVGSGSWKGQDAAKEIYLLDQNQqptttlLGFKKTYTYKN--TSSVHHGRWIMYEFEL 150
                                ********************98444445666699999999984..5555699*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MEGGYERYML LPGQRFCPME DELLMYYLKP KVNGEEVPGK EALICELDLY GEQEPWNIWE  60
RYAARRANDL RRNKDLYFFT KKKKVSAKAS RISRKVGSGS WKGQDAAKEI YLLDQNQQPT  120
TTLLGFKKTY TYKNTSSVHH GRWIMYEFEL AESQLLHKQE QVNKNDYSLC LLRNNDILPE  180
KKKRKLRQEE ENHEMLQAKK NVPAPSLLDF PQLEKWYDQQ QFLLPAEPQP SEENLGQQCQ  240
IPTLFSANEI MSDQDKNQLQ QMPAEEGILT PGEVDDLYGG NLSDVMVGAN WPDSFIGELV  300
TDDKPYTMEE GEWNDFLVQI LST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1181186KKKRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10490.13e-16NAC family protein