PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0007415.1_g000004.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

CAMTA

Protein Properties

Length: 1070aa MW: 120540 Da PI: 5.4674

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0007415.1_g000004.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	179.9	2.9e-56	20	136	2	118
CG-1 2 lkekkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyY 85 l+ k+rwl++ ei+aiL+n++k+++++e++++p+ gsl+L++rk++ryfrkDG++w+kkkdgktv+E+he+LK g+v+vl+cyY Rmu_sc0007415.1_g000004.1 20 LEAKHRWLRPAEICAILQNYKKFHISSEPASTPPGGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYY 103 6679****************************************************************************** PP CG-1 86 ahseenptfqrrcywlLeeelekivlvhylevk 118 ah+e+n++fqrr+yw+Lee+l++ivlvhy+evk Rmu_sc0007415.1_g000004.1 104 AHGEDNENFQRRSYWMLEEDLSHIVLVHYREVK 136 ****************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1070 aa Download sequence
MSDNKRYGLG NQLDIQQILL EAKHRWLRPA EICAILQNYK KFHISSEPAS TPPGGSLFLF 60 DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH CYYAHGEDNE NFQRRSYWML 120 EEDLSHIVLV HYREVKGNRT NFNHVKENEG VPYSNGAEEI ARQSEMENSV SSSFNPSSYQ 180 MRSQVTDATS LSSAQASEFE DVESAFYNQA SSRLQPMAEK INSEFSDAYY PAFSNDFQEN 240 LATIPGVDFS SLSQAYKRED SIDAGDTYEP RKDREFASWD DMENSVTGIQ SFQPSFSATH 300 SDTMGSFPKI ETLGHLHTDS FDKRLVYGIE NKPKVQQSWE TSEGSSNWPV DQSLQSHTEY 360 NVTAKLDEGA NTTDLLKSLG PFLMDPDKQN DLQFHLSNTD TISKRNDSIE RKADHPSAIK 420 PLLGFDDGLK KLDSFNRWMS KELEDVDEPQ MQSSSGAYWD TVESENEVDE SSVPLQVRLD 480 SYMLGPSLSH DQLFSIVDFS PNWAYENSEI KVLITGKFLK SQHVEGCKWS CMFGEVEVPA 540 EVIAHGVLRC YTPVHKAGRV PFYVTCSNRL ACSEVREFEY RVAQTQDVDT KDYYSDCSNE 600 TLNKRFEKLL SLSSTSSNSD TASTLEDSEL NSKITSMLKS DDDEWDKMLQ LMSVDEFSLE 660 RVQEQLLQQL LKEKLRAWLL QKLAAGGKGP SVLDEGGQGV LHFGAALGYD WVLLPTITAG 720 VSVNFRDVNG WTALHWAAFC GRERTVASLI ALGAAPGALT DPTTKYPSGE TPADLASEQG 780 HKGIAGYLAE SALSAHLESL NLDIKDGNST EISGTKAVSS SSRDGELTDG LSLRDSLTAV 840 CNATQAAARI HQVFRVQSFQ RKQLKEYDGD KFGLSNERAL SLIAVKSNKA GKRDEHVDAA 900 AVRIQNKFRS WKGRKDYLII RQRIVKIQAH VRGHQVRKNY RKIVWSVGIV EKIILRWRRK 960 GSGLRGFKPE PITEAPSMQV SSTKDDDYDL LKEGRKQTEE RLQKALARVK SMVQYPEARD 1020 QYHRLLNVVT EIQETKVLNS SEGTSAYMDD DLIDIEALFD DDIFMPTAAS

Sequence ? help Back to Top

Protein Sequence Length: 1070 aa Download sequence

MSDNKRYGLG NQLDIQQILL EAKHRWLRPA EICAILQNYK KFHISSEPAS TPPGGSLFLF  60
DRKVLRYFRK DGHNWRKKKD GKTVKEAHER LKAGSVDVLH CYYAHGEDNE NFQRRSYWML  120
EEDLSHIVLV HYREVKGNRT NFNHVKENEG VPYSNGAEEI ARQSEMENSV SSSFNPSSYQ  180
MRSQVTDATS LSSAQASEFE DVESAFYNQA SSRLQPMAEK INSEFSDAYY PAFSNDFQEN  240
LATIPGVDFS SLSQAYKRED SIDAGDTYEP RKDREFASWD DMENSVTGIQ SFQPSFSATH  300
SDTMGSFPKI ETLGHLHTDS FDKRLVYGIE NKPKVQQSWE TSEGSSNWPV DQSLQSHTEY  360
NVTAKLDEGA NTTDLLKSLG PFLMDPDKQN DLQFHLSNTD TISKRNDSIE RKADHPSAIK  420
PLLGFDDGLK KLDSFNRWMS KELEDVDEPQ MQSSSGAYWD TVESENEVDE SSVPLQVRLD  480
SYMLGPSLSH DQLFSIVDFS PNWAYENSEI KVLITGKFLK SQHVEGCKWS CMFGEVEVPA  540
EVIAHGVLRC YTPVHKAGRV PFYVTCSNRL ACSEVREFEY RVAQTQDVDT KDYYSDCSNE  600
TLNKRFEKLL SLSSTSSNSD TASTLEDSEL NSKITSMLKS DDDEWDKMLQ LMSVDEFSLE  660
RVQEQLLQQL LKEKLRAWLL QKLAAGGKGP SVLDEGGQGV LHFGAALGYD WVLLPTITAG  720
VSVNFRDVNG WTALHWAAFC GRERTVASLI ALGAAPGALT DPTTKYPSGE TPADLASEQG  780
HKGIAGYLAE SALSAHLESL NLDIKDGNST EISGTKAVSS SSRDGELTDG LSLRDSLTAV  840
CNATQAAARI HQVFRVQSFQ RKQLKEYDGD KFGLSNERAL SLIAVKSNKA GKRDEHVDAA  900
AVRIQNKFRS WKGRKDYLII RQRIVKIQAH VRGHQVRKNY RKIVWSVGIV EKIILRWRRK  960
GSGLRGFKPE PITEAPSMQV SSTKDDDYDL LKEGRKQTEE RLQKALARVK SMVQYPEARD  1020
QYHRLLNVVT EIQETKVLNS SEGTSAYMDD DLIDIEALFD DDIFMPTAAS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	0.0	CAMTA family protein