PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0007066.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ZF-HD | ||||||||
Protein Properties | Length: 86aa MW: 9452.56 Da PI: 7.739 | ||||||||
Description | ZF-HD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | ZF-HD_dimer | 98.3 | 5.9e-31 | 20 | 74 | 3 | 59 |
ZF-HD_dimer 3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 +vrY eC+kNhAa +Gg+avDGC+Efm+s geeg +aal+CaACgCHRnFHRreve+ Rmu_sc0007066.1_g000005.1 20 NVRYVECQKNHAAGVGGYAVDGCREFMAS-GEEG-TAALTCAACGCHRNFHRREVET 74 79**************************9.6664.689****************875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 86 aa Download sequence |
MRKRQVVVRR EEPSSNTIRN VRYVECQKNH AAGVGGYAVD GCREFMASGE EGTAALTCAA 60 CGCHRNFHRR EVETVCECSS PTSTEA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G28917.1 | 1e-26 | ZF-HD family protein |