PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0006792.1_g000018.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 95aa MW: 10537.9 Da PI: 11.2187 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 64.5 | 4e-20 | 47 | 95 | 1 | 49 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktie 49 a+g+kdrhsk++T++g+Rd RvRl a++a++f+d qd+L + ++sk+++ Rmu_sc0006792.1_g000018.1 47 ATGRKDRHSKVCTAKGPRDHRVRLAAHTAIQFYDAQDRLRYYRPSKAVD 95 589********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 95 aa Download sequence |
MKESHNNLHH RAMTSSSAAS LLGLGIRSAS SSTASEIVEA RGHILRATGR KDRHSKVCTA 60 KGPRDHRVRL AAHTAIQFYD AQDRLRYYRP SKAVD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 7e-27 | TCP family protein |