PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0006458.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | HSF | ||||||||
Protein Properties | Length: 101aa MW: 11236.6 Da PI: 4.1187 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 48.5 | 2.4e-15 | 49 | 100 | 3 | 54 |
HHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHH CS HSF_DNA-bind 3 lkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFv 54 l+k++++++d +l+ +isw ++g+sfvv+d+ efa+ vLp+ Fkh+n++ Fv Rmu_sc0006458.1_g000003.1 49 LSKTFDLVNDTSLDLIISWGSTGRSFVVWDPVEFARLVLPRNFKHKNLSTFV 100 689************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 101 aa Download sequence |
MSKIKGSEIG EGLTREDESC GGDDEDGDER GEEEEPLQCL QGIPMPLCLS KTFDLVNDTS 60 LDLIISWGST GRSFVVWDPV EFARLVLPRN FKHKNLSTFV C |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G03720.1 | 3e-28 | HSF family protein |