PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0006455.1_g000002.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | TCP | ||||||||
Protein Properties | Length: 124aa MW: 14120 Da PI: 9.2125 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 94.3 | 2.4e-29 | 20 | 88 | 1 | 70 |
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssa 70 a+g+kdr sk++T +g+Rd RvRl a++a++f+d+qd LG+d++s +++WL+++ak+ai++l+ ++++ Rmu_sc0006455.1_g000002.1 20 ATGRKDRYSKVCTTKGPRDHRVRLAAHTAIQFYDVQDWLGYDRPSMAVDWLIKKAKAAIDKLPPW-NPNS 88 589***********************************************************998.2222 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 124 aa Download sequence |
MMEESWDRRN REARGHILRA TGRKDRYSKV CTTKGPRDHR VRLAAHTAIQ FYDVQDWLGY 60 DRPSMAVDWL IKKAKAAIDK LPPWNPNSIS VQTTSSLTVP ISAAQDTERE PPFLDGGGSE 120 FFVC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 6e-35 | TCP family protein |