PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006201.1_g000002.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family G2-like
Protein Properties Length: 332aa    MW: 35309.3 Da    PI: 7.0999
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006201.1_g000002.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.52e-30118171155
                    G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                                +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  Rmu_sc0006201.1_g000002.1 118 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 171
                                59*******************.********************************8 PP
2Myb_DNA-binding483e-15120170148
                                TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
            Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                                r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
  Rmu_sc0006201.1_g000002.1 120 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 170
                                789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    
MREDDSNWFS RWEEQLPSPE ELMPLSQTLI SPDLALAFDI RSNPNPTPNP ITNTNTTSSP  60
QHAPTPPPPP VSSLPPATPT HPNSSADFAD SADLGSGGGG GGGGGGAPGD EPARTLKRPR  120
LVWTPQLHKR FVDAVAHLGI KNAVPKTIMQ LMSVDGLTRE NVASHLQKYR LYLKRMQGLS  180
AGTGGGGGGG GSADPATDHL FASSPVPAHF LHPGRPNSDH FLPFVPVALQ HHQQQQQHMA  240
AAAAVAATHP QMQQTPQYHH HRQPQVGHFG SPPNPNGQFE HPFLARQSQA VHRMGAPIHS  300
PAVPGYIEDM ESANATGATG RKVLTLFPTG DD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.15e-72G2-like family protein