PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006101.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 237aa    MW: 27056.8 Da    PI: 4.9159
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006101.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM44.84e-1497651128
                        NAM  51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                                ++a++ e +fF+++  +y++++r+n +tk+gyWk tgk+           g k+tL+fy+ r pk+++t+Wv+hey l
  Rmu_sc0006101.1_g000005.1   9 TEAQDMERFFFTRKYYEYNKSSRSNWSTKKGYWKITGKE----------RGNKRTLTFYQDRVPKPNETSWVIHEYYL 76 
                                45677899****************************993..........5899***********************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
LAARLGTDTE AQDMERFFFT RKYYEYNKSS RSNWSTKKGY WKITGKERGN KRTLTFYQDR  60
VPKPNETSWV IHEYYLPGNG VISYLKQAQG DFVICHLMIK SDKKDSSRSN EGEPGNAGVS  120
NCENQAADEM DQEGREELLF HQPQPQGDRC FSALWSRASH ELEAVLQTNS TNDDCNELES  180
PFGDGDSCFL DGNEVSTCDE YEIVYDVSPQ RPPVNFWLKV RPANAYGSNA IRKSTLL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32510.11e-15NAC family protein