PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006047.1_g000016.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 288aa    MW: 32662.2 Da    PI: 8.5526
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006047.1_g000016.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B348.71.4e-151822711299
                                HTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS
                         B3  12 ksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkldgrsefe 91 
                                + +  +++ +fa+eh   + +s  +tl+ ++ ++W+ ++++  +s++     v ++GWk F ++n+L++ D++vF+l+++++f 
  Rmu_sc0006047.1_g000016.1 182 RCSGAYISPSFAKEHVCRPGTSCNVTLQISKEKVWTAQCTVGENSEHklyaRVSGAGWKAFKEDNHLEVHDVCVFELIEERTF- 264
                                4455799********777788889***************9966666655555566**********************987777. PP

                                .EEEEE-S CS
                         B3  92 lvvkvfrk 99 
                                 +v+++r+
  Rmu_sc0006047.1_g000016.1 265 -KVSIIRA 271
                                .9999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 288 aa     Download sequence    
MATFPRPMAS PSFCLKIVTA NDLRDGKELP ETAVKKYGHC MAESIFLKAP NCGTWWPIEV  60
KRSVRGGRMW LHKGWQDFAN FYSLDQGYFA LFTYEGEHSH FLVRLFHWND MEIDYPIHGG  120
GVPKRKRTGA NRNTPPAYLE ARTSPTSSGS STDENQNDLS TATSFKSDKP LLMLRMTATY  180
IRCSGAYISP SFAKEHVCRP GTSCNVTLQI SKEKVWTAQC TVGENSEHKL YARVSGAGWK  240
AFKEDNHLEV HDVCVFELIE ERTFKVSIIR AKVKINKQDG ESEDKLMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18960.17e-12B3 family protein