PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0006047.1_g000015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | B3 | ||||||||
Protein Properties | Length: 174aa MW: 19538.5 Da PI: 9.9284 | ||||||||
Description | B3 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 51.5 | 1.8e-16 | 62 | 160 | 2 | 99 |
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTEEEE-....TTHHHHHHHHT--TT-E CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgryvlt....kGWkeFvkangLkegDf 79 + + +++++l++ + ++ +fa++h s +l+l++++ r+W +li+ + ++ v++ +GWk F ++n+L+egD+ Rmu_sc0006047.1_g000015.1 62 IMIKMTAYYLRRE-MFISASFATKHlcR--AGASCDLSLQTPDMRTWIAELIVYETTESRVFAkikgAGWKAFKEENHLEEGDV 142 5667899999998.9**********662..445679***************8855555544444777***************** PP EEEEE-SSSEE..EEEEE-S CS B3 80 vvFkldgrsefelvvkvfrk 99 +v++l+++ +f +v++fr+ Rmu_sc0006047.1_g000015.1 143 CVLELIEECKF--RVSIFRA 160 ******98888..9***997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 174 aa Download sequence |
MGIDSTRTDG IPKRKRTRAH GGMPNAYLKA ARAISNSSGS SGNEHLNVLS TANSFKSDKP 60 FIMIKMTAYY LRREMFISAS FATKHLCRAG ASCDLSLQTP DMRTWIAELI VYETTESRVF 120 AKIKGAGWKA FKEENHLEEG DVCVLELIEE CKFRVSIFRA RVKINELSEA GRPR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G18990.1 | 1e-08 | B3 family protein |