PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0006047.1_g000007.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 163aa    MW: 19219 Da    PI: 6.6176
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0006047.1_g000007.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B332.81.3e-10891464499
                                -EEEEEE..EEETTE....EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
                         B3  44 rsWevkliyrkksgr....yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                                r+W+ ++++  +s++     v ++GWk F ++n L++ D++vF+l+++++f  +v+++r+
  Rmu_sc0006047.1_g000007.1  89 RVWTAQCTVGENSEHklyaRVSGAGWKAFKEDNYLEVHDVCVFELIEERTF--KVSIIRA 146
                                89999998866666655545566**********************987777..9999886 PP
Sequence ? help Back to Top
Protein Sequence    Length: 163 aa     Download sequence    
MADSIFLKAP NCGTWWPIEV KRSVCGSRMW SHKGWQEFAN FYSLDQGYFA LFTYEGKHSH  60
FLVRLFHWND MEIDYPIHGR GMCVCVFERV WTAQCTVGEN SEHKLYARVS GAGWKAFKED  120
NYLEVHDVCV FELIEERTFK VSIIRAKVKI NKLDEESEDK LMF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49475.12e-10B3 family protein