PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0005733.1_g000006.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 146aa MW: 17289.2 Da PI: 10.8688 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 60.8 | 4.4e-19 | 11 | 83 | 53 | 128 |
NAM 53 aeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++++ew+fF++ ++ y++ k+ +ratk+g Wk+ g++++v+++ +++++g +k L+fy g+ kt+Wvmhey+l Rmu_sc0005733.1_g000006.1 11 KSNEEWFFFTQLNR-YKNTKNISRATKEGAWKSNGNKRDVTKEhnSESVIGKRKLLTFYLGE----IKTNWVMHEYSL 83 35669999999877.778899********************98666677**********543....589*******97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 146 aa Download sequence |
MLLCTAKSRS KSNEEWFFFT QLNRYKNTKN ISRATKEGAW KSNGNKRDVT KEHNSESVIG 60 KRKLLTFYLG EIKTNWVMHE YSLLSRAKNQ LQMRLLMVTE PELEGQLQMG RLLNATELPL 120 MLAKQRKEMK VLQAKWVVKQ RRVEER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G10500.1 | 1e-15 | NAC family protein |