PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0005706.1_g000009.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | HSF | ||||||||
Protein Properties | Length: 395aa MW: 44269.7 Da PI: 8.1388 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 114.5 | 6.9e-36 | 26 | 118 | 2 | 103 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhks 85 Fl+k+y++++d+++++++sw e+ ++fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+k+ ++ weF+++ Rmu_sc0005706.1_g000009.1 26 FLTKTYQLVDDPATDHIVSWGEDDTTFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDR---------WEFANEF 100 9*****************************************************************99.........******* PP XXXXXXXXXXXXXXXXXX CS HSF_DNA-bind 86 Fkkgkkellekikrkkse 103 Fkkg+k+ll++i+r+k++ Rmu_sc0005706.1_g000009.1 101 FKKGEKHLLCEIHRRKTA 118 ***************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence |
MALMIDNCGE GILLSLDSHK SVPAPFLTKT YQLVDDPATD HIVSWGEDDT TFVVWRPPEF 60 ARDLLPNYFK HNNFSSFVRQ LNTYGFRKIV PDRWEFANEF FKKGEKHLLC EIHRRKTAQP 120 TQLPINHHHH GHHQYPHSPL GNHHVVTGPG FFPFQPSRGS NSPSDSDDQF PNWCDSPPPL 180 VSSPPSGGGG PLNTSYCSNV ATNTVTALSE DNERLRRSNT MLMSELNHMR KLYNDIIYFV 240 QNHVKPVTPS NSYPGSLLLC NPSQNTLNTN SSAAINKPLN QVLGYYHGNP KQNQPHLQPM 300 AHVMMNNNNV SSPTTTTTSK STSSVTIIED RPGNISNNNG CKTKLFGVPL LHSKKRLHPE 360 YNNGSNHMAM EASKTRLILE KDHDLGLHLM PPSTC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G46264.1 | 1e-109 | HSF family protein |