PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0005651.1_g000005.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | NAC | ||||||||
Protein Properties | Length: 147aa MW: 16990.3 Da PI: 7.497 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 44.7 | 4.3e-14 | 13 | 140 | 6 | 125 |
NAM 6 rFhPtdeelvveyLkkkvegkkleleevikevdiykv...ePwdLpkkvka.....eekewyfFskrdkkyatgkrknr.atks 80 FhPtd++l+ yL +++++ + +++++e++iy + Pwd+ + +++ +++ +yfFs+ +k + ++r + Rmu_sc0005651.1_g000005.1 13 TFHPTDSDLLGSYLYNRIKSPTPIGKQTFPEIEIYGTtglPPWDIWR-IYEpskfpHQNYIYFFSRVKKLGSC--CSRRiGCDG 93 5*******************996555678888887654448****63.2222233355677888887776544..444435689 PP NAM 81 gyWkatgkdkevlsk.kgelvglkktLvfykg.rapkgektdWvmhe 125 g+W++t k+++++ +el g + + + ++ ++ +++ W+m++ Rmu_sc0005651.1_g000005.1 94 GTWRETEAAKPIYVSgIEELYGKLRKFRYENNkDKAFEHHAAWLMDD 140 **************8445567888888888552444457899*9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 147 aa Download sequence |
MSLEDLEVGV VKTFHPTDSD LLGSYLYNRI KSPTPIGKQT FPEIEIYGTT GLPPWDIWRI 60 YEPSKFPHQN YIYFFSRVKK LGSCCSRRIG CDGGTWRETE AAKPIYVSGI EELYGKLRKF 120 RYENNKDKAF EHHAAWLMDD DTLKASA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G69490.1 | 4e-07 | NAC family protein |