PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005625.1_g000002.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 427aa MW: 48077.6 Da PI: 9.3198

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005625.1_g000002.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.8	7.8e-31	90	143	2	55
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWt++LH +F++ave+LGG+e+AtPk +l+lm+v gL+++hvkSHLQ+YR+ Rmu_sc0005625.1_g000002.1 90 PRLRWTSDLHLAFIHAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRS 143 8****************************************************7 PP
2	Myb_DNA-binding	46.5	8.3e-15	91	142	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT ++++ +++av++lGg t+k++ + m+ g++ ++ks++q+y+ Rmu_sc0005625.1_g000002.1 91 RLRWTSDLHLAFIHAVERLGGQeraTPKLVLQLMNvRGLSIAHVKSHLQMYR 142 89************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 427 aa Download sequence
MADPEMIEIS VEADDDQSTT DGSKDFRSKS SSPKASCLFF DLNEDATSDD HGDVSKNIGE 60 ARESKTSTEG KEQTATSSGA VRQYVRSKMP RLRWTSDLHL AFIHAVERLG GQERATPKLV 120 LQLMNVRGLS IAHVKSHLQM YRSKKLDESG QVLPQFNRSR GMLLQGREHI VEAYQQYNPF 180 RHFRLDDRGS HFPSPPLKHQ PYDNLNANSS RLISQWSNSG MENHRSINTI TSSHMFSVKE 240 VMTRVNGPIR SSRFLEEKRW PPREMIGNHI RGRRHSLNIS WGNTINVAQP NSVGSPQASS 300 NRHLPNHTTC SPKFISSSYK PVSDPHEVRK PDDSINGETF GAEVGDNMQT LKQKKWLPLN 360 LQLGLRQEFS ICSDEMKDGE QESTRDIETT LSLSLSSSSP RQQDQSSTPT SRVRHLSFAL 420 SPGLKPT

Sequence ? help Back to Top

Protein Sequence Length: 427 aa Download sequence

MADPEMIEIS VEADDDQSTT DGSKDFRSKS SSPKASCLFF DLNEDATSDD HGDVSKNIGE  60
ARESKTSTEG KEQTATSSGA VRQYVRSKMP RLRWTSDLHL AFIHAVERLG GQERATPKLV  120
LQLMNVRGLS IAHVKSHLQM YRSKKLDESG QVLPQFNRSR GMLLQGREHI VEAYQQYNPF  180
RHFRLDDRGS HFPSPPLKHQ PYDNLNANSS RLISQWSNSG MENHRSINTI TSSHMFSVKE  240
VMTRVNGPIR SSRFLEEKRW PPREMIGNHI RGRRHSLNIS WGNTINVAQP NSVGSPQASS  300
NRHLPNHTTC SPKFISSSYK PVSDPHEVRK PDDSINGETF GAEVGDNMQT LKQKKWLPLN  360
LQLGLRQEFS ICSDEMKDGE QESTRDIETT LSLSLSSSSP RQQDQSSTPT SRVRHLSFAL  420
SPGLKPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38300.1	6e-36	G2-like family protein