PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005454.1_g000024.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TALE

Protein Properties

Length: 614aa MW: 68536.2 Da PI: 5.1439

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005454.1_g000024.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	27	7.6e-09	419	451	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp+ +e+ LA+++gLt +qV +WF N R + Rmu_sc0005454.1_g000024.1 419 LPYPKDSEKVMLARQTGLTRNQVANWFINARVR 451 69*****************************88 PP
2	BELL	114.4	5.8e-37	277	348	1	72
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 erq+lq+kk+kLls+l+eVd+rYkqy++q+q v++ F+ +ag g+a pYt+lAl+aiSrhFr+L dai++qi Rmu_sc0005454.1_g000024.1 277 ERQDLQNKKTKLLSMLDEVDRRYKQYYHQMQSVVAFFDKAAGNGAAGPYTALALQAISRHFRSLHDAIKGQI 348 799*******************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 614 aa Download sequence
MWLADFTTSI LAAHNSFPRA CFQESVDDLD GYHQFRPPSN MMMYMNQASY PGSYTEVLSG 60 GSFSPNKCSE SDGGRNEMMF IPPTSGPVRD CVGGDSLIGS PDGKRGIQDH GLSLSLATQI 120 PPAVSVPSFQ YQYLNSSLPS VLSTSQILGK GEFQCKGDDY SQSDEFRNFE NLTSGLYDSL 180 KTQNFSNPMC SMVPKEMHSE AYLYDSLGFS NSLLNTKYLK AAQQLLDEVV NVRKALKQSR 240 SNKHQRTDGS KETDGIRMSS DPSEPSAVSS VELSPVERQD LQNKKTKLLS MLDEVDRRYK 300 QYYHQMQSVV AFFDKAAGNG AAGPYTALAL QAISRHFRSL HDAIKGQIQA AQRSLGEKDT 360 PSDAQGEVIP RLRYVDQQLR QQRAFQQHGV MQHSWRPQRG LPESSVAILR AWLFEHFLLP 420 YPKDSEKVML ARQTGLTRNQ VANWFINARV RLWKPMIEEM YKEEFGEEMD SKSSPENVLK 480 EARVEFSASE DRRDELRESL ISTTADSIEP GQLHDSKSGI TKLQDHGQRP NADDRSVYLD 540 ANENAVATYD MSGLGNAVGS EVSLALELRH CEEHDGFPAP NGSEVRGNDP EASLDCYYGD 600 PGQQQYSCAE FGCL

Sequence ? help Back to Top

Protein Sequence Length: 614 aa Download sequence

MWLADFTTSI LAAHNSFPRA CFQESVDDLD GYHQFRPPSN MMMYMNQASY PGSYTEVLSG  60
GSFSPNKCSE SDGGRNEMMF IPPTSGPVRD CVGGDSLIGS PDGKRGIQDH GLSLSLATQI  120
PPAVSVPSFQ YQYLNSSLPS VLSTSQILGK GEFQCKGDDY SQSDEFRNFE NLTSGLYDSL  180
KTQNFSNPMC SMVPKEMHSE AYLYDSLGFS NSLLNTKYLK AAQQLLDEVV NVRKALKQSR  240
SNKHQRTDGS KETDGIRMSS DPSEPSAVSS VELSPVERQD LQNKKTKLLS MLDEVDRRYK  300
QYYHQMQSVV AFFDKAAGNG AAGPYTALAL QAISRHFRSL HDAIKGQIQA AQRSLGEKDT  360
PSDAQGEVIP RLRYVDQQLR QQRAFQQHGV MQHSWRPQRG LPESSVAILR AWLFEHFLLP  420
YPKDSEKVML ARQTGLTRNQ VANWFINARV RLWKPMIEEM YKEEFGEEMD SKSSPENVLK  480
EARVEFSASE DRRDELRESL ISTTADSIEP GQLHDSKSGI TKLQDHGQRP NADDRSVYLD  540
ANENAVATYD MSGLGNAVGS EVSLALELRH CEEHDGFPAP NGSEVRGNDP EASLDCYYGD  600
PGQQQYSCAE FGCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75410.2	1e-97	TALE family protein