PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0005446.1_g000015.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 696aa MW: 77865.2 Da PI: 7.2599 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.4 | 5.8e-19 | 457 | 518 | 1 | 57 |
TT--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 1 rrkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 r+ R+++t+eq++ Leel+++ ++p+a+++++ +++l +++ ++V++WFqN+Ra+e++ Rmu_sc0005446.1_g000015.1 457 RSCRWNPTPEQIKDLEELYRSgIKTPTAQQIRQVTARLrnygRVEGKNVFYWFQNHRARERQ 518 567*****************99**************************************97 PP | |||||||
2 | Wus_type_Homeobox | 106.6 | 1.6e-34 | 458 | 520 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 + RW+PtpeQik Leely+sG++tP++++i+++ta+L++yG++e+kNVfyWFQN++aRerqk+ Rmu_sc0005446.1_g000015.1 458 SCRWNPTPEQIKDLEELYRSGIKTPTAQQIRQVTARLRNYGRVEGKNVFYWFQNHRARERQKR 520 67***********************************************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 696 aa Download sequence |
MPSLALVLAN PSDAVTGVEH LAHDLGRAPP FRDLPTRSRV LTSPFCWSPN GYGSAMADLL 60 WLVRTATKRV AEGWSSGRMG RNSDGLVEVD SGVMDATSGG DAYLARFGGL HCLGAQIRCL 120 QMGVQIRRWL LLDVYRDLDL GSRRVMISIF YEEPRCNHTM STTIACLGEQ CGESRDESEV 180 DWSADFLHSQ IANSDCWETR PEIAHPATPR LRADTIIFVS PSPATPCPWI IHALNGNGES 240 TARSNDCYNS SVVFSGYSGH RFACMWYGNS SPRHALHVCI ISFSIRSSFD ECVSGFFLSP 300 LPFLAAGDFS GFLVFASPTV KLSGADVTHF QGWAELADGL AGQEKCQAFG FFLGFGQESQ 360 DFARSRSYRN GDCRDPNRNN NRDLPEYSIK AANPQPAVQP VLFTPKRSST SNMTQNPVLP 420 FNHHHHRMVP VMSDEQGRSS SGCFYSDKQP AAGAPRRSCR WNPTPEQIKD LEELYRSGIK 480 TPTAQQIRQV TARLRNYGRV EGKNVFYWFQ NHRARERQKR RRELISMHQS DTKQQQQTLI 540 NSNITSLQKK ESAGVSSVGR LEVEQQNRPT LPNFTVLSDQ ESSSVLQERM MSMVKSNSSR 600 LPVEQSDSPG PTSSDTNASS ATLICTKLLD FHHYYDYDYG MVLTAPNIYK EEEKDSKETQ 660 TLELFPLESD NLKSAKHTKL PMSRTSTADF KEDQYY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G01500.1 | 2e-24 | WOX family protein |