PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005314.1_g000005.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 209aa    MW: 23280.1 Da    PI: 5.0114
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005314.1_g000005.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.40.000233557123
                               EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                               y+C  C++ F++   L  H++ H
  Rmu_sc0005314.1_g000005.1 35 YECVFCKRGFTTAQALGGHMNIH 57
                               99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 209 aa     Download sequence    
MESQSNHRHD EEDSKSSSDE EAEDLNDDLG TGRSYECVFC KRGFTTAQAL GGHMNIHRKE  60
RAKPRPTSAP TSIASKAADE HVSDLMRSYR SLQSYTGPHF ATAPEVDVNY RTYIPAPTWI  120
VGQAHSDHEE LCARNYQLRH QNLFATDDDC RNWRSGSGLS LGIGPSAHDD DDEDHVGHDH  180
HKKEIEQING ACSSEGDGLD LELRLGHDP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43540.11e-12C2H2 family protein