PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005263.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 507aa MW: 56663.3 Da PI: 8.498

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005263.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	37.2	6.5e-12	100	159	1	60
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +ke +r +r+ +NR++A+ R+RKk ++ Le ++keLe N+ L +++++l +e l+ Rmu_sc0005263.1_g000006.1 100 DKEYRRLKRLLRNRVSAQQARERKKVYVNDLESRAKELEDANSNLEEKISTLINENTMLR 159 58899***********************************************99987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MSSSLENQHQ AGSSSSSWRR FNANNSSSSP HSLQDHQSDK KHKLEDSDED MFTVPDVEAI 60 PPDDNPISTS TVTNNNATSK NNPGEIGLSG KRRRGRNPVD KEYRRLKRLL RNRVSAQQAR 120 ERKKVYVNDL ESRAKELEDA NSNLEEKIST LINENTMLRK VLMNTRPKVD ESIDQKQDRS 180 VNISTTRGLQ TSFQGRLDGG VLRRGSKSEQ SQWDGGVFRD YCGELKGAMA VPQVGNLPPR 240 SVEFEASALL HGLRFALHVG FLNLEVEGDA LSVISSINNS LDDLSLEGHI LDEVKFEITQ 300 LHRLATPHTV DITAREHHRD DQTEETNQLT KFHGQRPPQF AGKAGSGQME NSDTEARYQL 360 LRHSQSPKSA SSSEPLDAKL QKFAVADARR SHRELSDLQF HMKAMLWGHL GKGGNVASRW 420 RICDFRIPPR SLNIGLHDAC LSWALPCLVD VPNLQPTQPL RPTQPTLHTC LRPSLPEAQP 480 PASPPQPTLP PARSPLVAQA YWPSRSW

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MSSSLENQHQ AGSSSSSWRR FNANNSSSSP HSLQDHQSDK KHKLEDSDED MFTVPDVEAI  60
PPDDNPISTS TVTNNNATSK NNPGEIGLSG KRRRGRNPVD KEYRRLKRLL RNRVSAQQAR  120
ERKKVYVNDL ESRAKELEDA NSNLEEKIST LINENTMLRK VLMNTRPKVD ESIDQKQDRS  180
VNISTTRGLQ TSFQGRLDGG VLRRGSKSEQ SQWDGGVFRD YCGELKGAMA VPQVGNLPPR  240
SVEFEASALL HGLRFALHVG FLNLEVEGDA LSVISSINNS LDDLSLEGHI LDEVKFEITQ  300
LHRLATPHTV DITAREHHRD DQTEETNQLT KFHGQRPPQF AGKAGSGQME NSDTEARYQL  360
LRHSQSPKSA SSSEPLDAKL QKFAVADARR SHRELSDLQF HMKAMLWGHL GKGGNVASRW  420
RICDFRIPPR SLNIGLHDAC LSWALPCLVD VPNLQPTQPL RPTQPTLHTC LRPSLPEAQP  480
PASPPQPTLP PARSPLVAQA YWPSRSW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17609.2	4e-42	bZIP family protein