PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005197.1_g000019.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bZIP

Protein Properties

Length: 362aa MW: 40134.7 Da PI: 9.9653

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005197.1_g000019.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	39	1.8e-12	177	233	6	62
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 + +r +NR++A++sR++K+++++e e+k+k+Lea+ L ++e k++ + l++e Rmu_sc0005197.1_g000019.1 177 KLKRILSNRVSAQKSRLKKLQYVAEMEKKAKALEAQVALLSPQVEFFKNQNYFLQME 233 679999******************************999999999888888777665 PP

Sequence ? help Back to Top
Protein Sequence Length: 362 aa Download sequence
MEADKKFSKI SQLETVAPWA NSPFSMMAPS TLPLAPSASQ VWKRPYLMNH FENGEGNRGA 60 KTHFQPLDIR TSTTTLIPTP TTTTNPTPNA TITTTTITTP TPSTTTPITT TTPAVEAIKD 120 KGKKPQKESG SDADHGNDNK IVTVKTEKEE TDDTLIGAPL QIRVGRNVAP ESLDPRKLKR 180 ILSNRVSAQK SRLKKLQYVA EMEKKAKALE AQVALLSPQV EFFKNQNYFL QMEQHALNES 240 ISVRAVDKLH KDANKEEVQR LRLLQLKIFE QQQMQASMFI DMDGVGSMDP KMVNYPGFTQ 300 SELGKMLCSS DSKKAQSGEK TAAENLQNQI REAAEQTPDV KPSLGVAAGR NKELRLHFNK 360 TT

Sequence ? help Back to Top

Protein Sequence Length: 362 aa Download sequence

MEADKKFSKI SQLETVAPWA NSPFSMMAPS TLPLAPSASQ VWKRPYLMNH FENGEGNRGA  60
KTHFQPLDIR TSTTTLIPTP TTTTNPTPNA TITTTTITTP TPSTTTPITT TTPAVEAIKD  120
KGKKPQKESG SDADHGNDNK IVTVKTEKEE TDDTLIGAPL QIRVGRNVAP ESLDPRKLKR  180
ILSNRVSAQK SRLKKLQYVA EMEKKAKALE AQVALLSPQV EFFKNQNYFL QMEQHALNES  240
ISVRAVDKLH KDANKEEVQR LRLLQLKIFE QQQMQASMFI DMDGVGSMDP KMVNYPGFTQ  300
SELGKMLCSS DSKKAQSGEK TAAENLQNQI REAAEQTPDV KPSLGVAAGR NKELRLHFNK  360
TT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42380.2	7e-18	bZIP family protein