PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0005065.1_g000006.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

FAR1

Protein Properties

Length: 840aa MW: 95017.4 Da PI: 7.0646

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0005065.1_g000006.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	21.7	6.8e-07	84	166	9	88
FAR1 9 evGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHe 88 GF +++ +s k n+ + t+ C ++gk +++ k +++ r++ ++++gC klk +k + ++ we++ +e HnH+ Rmu_sc0005065.1_g000006.1 84 LNGFCIVTLNSDVGKGNR-RATITLGCERSGKYGRRTPKkgkKKNCGRPQGKKKCGCPFKLKGRKLEtNDDWELKVVEGIHNHA 166 568888888877775555.77889**9998766665522134444577788888888888777668*************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 840 aa Download sequence
MIISPYYNPR SCFNGGRQPK YPAANAIAAT IPCSASMEVD KAAGIGCSDV GSTFALDHTS 60 QFTTTEIFKS RKDLIEWVSR VGRLNGFCIV TLNSDVGKGN RRATITLGCE RSGKYGRRTP 120 KKGKKKNCGR PQGKKKCGCP FKLKGRKLET NDDWELKVVE GIHNHAAWYS KADISVSSRL 180 PSEDKLRGRD VFKDDISESG SEMQSLMIKL SKYNYIEQHR SCPQTKTILD FFLTHLSSFK 240 LLRAFARVLE VECISKQEGS HDGAILMIFG RTSTDIPFFV GIVFLSSNQK ESYVWALRTL 300 QGLMVTSGNT MPDIIVLITT EVALMEAVEV VFSRTKLLLC AWAFPSFVEF AYEEVFDLKE 360 ELDYFLKRLD VLISSPTAAN FELQLLQLHN DFSRYPAVLE YVTHTWLNPH KEKLVAAWTN 420 AFMHFGVANS LREYTKLQEI LGNLIENLTV PVKNQILKLE ESFEEIHAGL ELQETKINAS 480 LESCLTVNAD EFRLPEFKEL CGAISVTALY LVLQQMMLVN IVDGDLCHCA IRNTHGLPCA 540 HDLAKYKKGD RPIPLDCIDP YWMKLDTKPL GKNAECGVEE SMKLHKLFME MDTSDPSSPP 600 LPKIGGSAQC NTPTVHFKEE RQSEVYHMPL KYVGTCPAVL TPYIVDIKDV AADGHCGFRA 660 IASLLGNTNE DGWMTVRRDL MEELELKSAQ YAQLYRLESL GKRVIELSKS LDCFDRVCYD 720 TNHWMTMPEM GHIIATRYNV VLMHLSSVQS LTFLPLRTLP SSFSSLREIS VGFVNGHFVQ 780 VHLKPGHPMP PIARDWERYH EHERTFLEEW STLYSARLDH FKALQPEAYS KVDKEAIKID

Sequence ? help Back to Top

Protein Sequence Length: 840 aa Download sequence

MIISPYYNPR SCFNGGRQPK YPAANAIAAT IPCSASMEVD KAAGIGCSDV GSTFALDHTS  60
QFTTTEIFKS RKDLIEWVSR VGRLNGFCIV TLNSDVGKGN RRATITLGCE RSGKYGRRTP  120
KKGKKKNCGR PQGKKKCGCP FKLKGRKLET NDDWELKVVE GIHNHAAWYS KADISVSSRL  180
PSEDKLRGRD VFKDDISESG SEMQSLMIKL SKYNYIEQHR SCPQTKTILD FFLTHLSSFK  240
LLRAFARVLE VECISKQEGS HDGAILMIFG RTSTDIPFFV GIVFLSSNQK ESYVWALRTL  300
QGLMVTSGNT MPDIIVLITT EVALMEAVEV VFSRTKLLLC AWAFPSFVEF AYEEVFDLKE  360
ELDYFLKRLD VLISSPTAAN FELQLLQLHN DFSRYPAVLE YVTHTWLNPH KEKLVAAWTN  420
AFMHFGVANS LREYTKLQEI LGNLIENLTV PVKNQILKLE ESFEEIHAGL ELQETKINAS  480
LESCLTVNAD EFRLPEFKEL CGAISVTALY LVLQQMMLVN IVDGDLCHCA IRNTHGLPCA  540
HDLAKYKKGD RPIPLDCIDP YWMKLDTKPL GKNAECGVEE SMKLHKLFME MDTSDPSSPP  600
LPKIGGSAQC NTPTVHFKEE RQSEVYHMPL KYVGTCPAVL TPYIVDIKDV AADGHCGFRA  660
IASLLGNTNE DGWMTVRRDL MEELELKSAQ YAQLYRLESL GKRVIELSKS LDCFDRVCYD  720
TNHWMTMPEM GHIIATRYNV VLMHLSSVQS LTFLPLRTLP SSFSSLREIS VGFVNGHFVQ  780
VHLKPGHPMP PIARDWERYH EHERTFLEEW STLYSARLDH FKALQPEAYS KVDKEAIKID