PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0005045.1_g000054.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family C2H2
Protein Properties Length: 165aa    MW: 18165.9 Da    PI: 10.0552
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0005045.1_g000054.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.60.0001997119123
                                EEETTTTEEESSHHHHHHHHHHT CS
                    zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                                ++Cp+Cg+ F+    L  H+r+H
  Rmu_sc0005045.1_g000054.1  97 HECPICGMEFPIGQALGGHMRRH 119
                                79********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    
MQLSNEMKRA REDEQQTQDL VNCLMLLSKV DRNHSSSIRE QNSSGRVFAC KTCNREFSSF  60
QALGGHRASH KKPKLDGGAA DLLHLAQPSL PVKPKAHECP ICGMEFPIGQ ALGGHMRRHR  120
DVMSSAAERI RAAAVPVLKK SNSSKRVSCL NLDLNLAPPG YHLIS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59820.16e-39C2H2 family protein