PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004976.1_g000035.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

G2-like

Protein Properties

Length: 266aa MW: 29278.1 Da PI: 4.2952

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004976.1_g000035.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	89.2	3.9e-28	61	111	1	51
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 k rlrW+ +LH++Fv+av qLGG++kAtPk+i+++m+vkgL+l hvkSHLQ Rmu_sc0004976.1_g000035.1 61 KSRLRWSADLHASFVDAVYQLGGPHKATPKSIMQIMDVKGLSLFHVKSHLQ 111 68************************************************* PP
2	Myb_DNA-binding	47.2	5.2e-15	63	112	1	46
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqk 46 r+rW+++++ +vdav qlGg+ t+k+I++ m kg++l ++ks++q Rmu_sc0004976.1_g000035.1 63 RLRWSADLHASFVDAVYQLGGPhkaTPKSIMQIMDvKGLSLFHVKSHLQV 112 89**********************************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 266 aa Download sequence
MFGFGEEQGF QGPLTPNMDR GVVEGEEEEE EEEQEENSTD HSSSQIEPVA LPYVPSSYKL 60 KSRLRWSADL HASFVDAVYQ LGGPHKATPK SIMQIMDVKG LSLFHVKSHL QVKKHLQLRK 120 EAQSRYLSRA VENACEKLAH QFLGGCAADY AGVFGQNAAG LETMGSIPHQ KDLDLYPAYH 180 MTQIMQPSFD NQLGSFGNQL GSFQPESEAY FATGDHPISA GHSGNSSVQD FPTFDTDGNN 240 EVEILDDDPA ETYLILDTAE NGSDES

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G13640.1	1e-20	G2-like family protein