PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004972.1_g000008.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

TCP

Protein Properties

Length: 175aa MW: 19746.5 Da PI: 8.0668

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004972.1_g000008.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	76.2	9.4e-24	88	151	1	64
TCP 1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltg 64 a+g+kdr+ k++T++g+Rd +v l a++a++f+d+qd+LG+d++ +++W +++ak+ai+el+ Rmu_sc0004972.1_g000008.1 88 ATGRKDRNNKVYTAKGPRDHSVWLAAHTAIQFYDMQDRLGYDRPIMAVDWIIKKAKAAIDELPL 151 589**********************************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
MCPGDATNQD SPPTSGAEGD KTEQDEDGLI TLGFYVSSVL GFIIGFWGFC APLLLKVSWR 60 IAYFQYLNDI KIWNCHRNRE SRGHILRATG RKDRNNKVYT AKGPRDHSVW LAAHTAIQFY 120 DMQDRLGYDR PIMAVDWIIK KAKAAIDELP LWNLNSISVQ RTSSPTVPIS AAQDM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31070.1	4e-33	TCP family protein