PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004614.1_g000004.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 226aa MW: 24621.1 Da PI: 4.8711 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 44.2 | 3.3e-14 | 23 | 80 | 6 | 57 |
S--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 t+t+ ql++L+el++ ++p+ e+++e+ +l ++++++V++WFqN +a+e++ Rmu_sc0004614.1_g000004.1 23 TPTPVQLRILQELYYDkvLKNPTPEQIQEICLHLklygQIEDKNVFFWFQNLKARERQ 80 689***********96679*************************************97 PP | |||||||
2 | Wus_type_Homeobox | 83.8 | 2e-27 | 23 | 81 | 7 | 64 |
Wus_type_Homeobox 7 tPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 tPtp Q++iL+ely+ + l++P+ e+iq+i +L+ yG+iedkNVf+WFQN kaRerqk Rmu_sc0004614.1_g000004.1 23 TPTPVQLRILQELYYdKVLKNPTPEQIQEICLHLKLYGQIEDKNVFFWFQNLKARERQK 81 8************987899***************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 226 aa Download sequence |
MEETTKQPGV VPTRLSGRPI TGTPTPVQLR ILQELYYDKV LKNPTPEQIQ EICLHLKLYG 60 QIEDKNVFFW FQNLKARERQ KLREFQNVRV GGSLDLNFGS TSSTNDGRSI DLNFGSTSST 120 GTDGSIDLHF GSRVSYGADP YSFSLFNANT STTSFGTTGG QSFMEQQGGD HQEVETLPLF 180 PVHGENVLGN PKTTSEEGSA FGYYSGGSGG YNSGSPVSLE LSLNPS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 1e-20 | WOX family protein |