PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0004510.1_g000003.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | ARR-B | ||||||||
Protein Properties | Length: 682aa MW: 75004.6 Da PI: 5.8997 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 84.6 | 9.9e-27 | 200 | 253 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++W eLH++Fv av+qL G e+A+Pk+il+lm+v+gL++e+v+SHLQkYR Rmu_sc0004510.1_g000003.1 200 KPRVVWYGELHRKFVAAVNQL-GVERAVPKKILDLMDVEGLSRENVASHLQKYRQ 253 79*******************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 30.9 | 6.4e-10 | 203 | 252 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 W e++ ++v av+qlG + +k+I m +g++++++ s++qky+ Rmu_sc0004510.1_g000003.1 203 VVWYGELHRKFVAAVNQLGVEraVPKKILDLMDvEGLSRENVASHLQKYR 252 56888********************************************7 PP | |||||||
3 | Response_reg | 74.6 | 3.8e-25 | 16 | 124 | 1 | 109 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahge 82 vl vdD+p+ ++ l+ +l+k +y +v++a ++ +ale+l+e++ +Dl++ D++mp+mdG++ll+ e++lp+i+++++++ Rmu_sc0004510.1_g000003.1 16 VLAVDDDPTCLKFLEGLLRKCKY-HVTTANQAIKALEMLRENRdkYDLVISDVNMPDMDGFQLLELVGL-EMDLPVIMLSGYSD 97 799********************.***************999889*******************87754.558*********** PP HHHHHHHHHTTESEEEESS--HHHHHH CS Response_reg 83 eedalealkaGakdflsKpfdpeelvk 109 +++ + ++ Ga +l Kp+ +eel + Rmu_sc0004510.1_g000003.1 98 FKLVMKGISHGACNYLLKPVRIEELKN 124 ************************987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 682 aa Download sequence |
MTVEDQRDRF PEGMRVLAVD DDPTCLKFLE GLLRKCKYHV TTANQAIKAL EMLRENRDKY 60 DLVISDVNMP DMDGFQLLEL VGLEMDLPVI MLSGYSDFKL VMKGISHGAC NYLLKPVRIE 120 ELKNIWQHVV RKKFDSKDQK KSSNQDKSNG IGEGVQGASP TGSSDQNGKL SKKRKDQNGD 180 EEEESEDDEH ETEDSSSQKK PRVVWYGELH RKFVAAVNQL GVERAVPKKI LDLMDVEGLS 240 RENVASHLQK YRQYLKRISS GMVGSLGGKE SSYVRMGVLD GSRDLQSLRS GRISSTTLST 300 YTSGGMLSRL NSPAGLSTGG ITSSGLGQPG HSQNVSNYIN PFAKLQPTVP PNQSSNSFQA 360 TPALLQLNQL QQSKCITHNG KSYPDNDSTN YTISSTFRNS GVSSSPLPSD SNFSSNHLML 420 HGTPQQTHGT GVFGNPTSVK VSFDIGISGS PNFLDYNRCS ENFQGGARLS SFPSNALPMS 480 EPFNHGQMHA NNLGVFSGRP QIGNTLNDFS SVSALSAPVD ELRGNAQNQE GLIGDVVPTL 540 SYMPKQRWEE HKEGYNHELN QTFSAINSPG SALGVNGRVS QSLDQNVAVC SYERNSSLFD 600 QLNGATAMFE QPSEAGKSSM ETKMKLNEDY FLEQIKSPSG FVQNSYESLN DIMSTIMKRE 660 QNENLLLDAE FGFDAYSLGS CM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G25180.1 | 1e-104 | ARR-B family protein |