PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004483.1_g000041.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family B3
Protein Properties Length: 451aa    MW: 49527.7 Da    PI: 7.7499
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004483.1_g000041.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3100.78.8e-32107211199
                                EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EE CS
                         B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfv 80 
                                f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v
  Rmu_sc0004483.1_g000041.1 107 FDKVVTPSDVGKLNRLVIPKQHAEKYfpldSSTNEKGLLLNFEDRTGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIV 190
                                89***************************966778999********************************************** PP

                                EEEE-.SS.SEE..EEEEE-S CS
                         B3  81 vFkld.gr.sefelvvkvfrk 99 
                                 F++  g+  + +l++ ++r+
  Rmu_sc0004483.1_g000041.1 191 SFQRGlGEsGKDRLYIDWRRR 211
                                ***666776888999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 451 aa     Download sequence    
MNFGASRDGG GGFSEDEIRG KLPFSSYSPT SPSSSSSSPH FNNTSTATAT LLPGGLSSWD  60
TYGGGGGPDT RLELMDSSPR NADNNQESNN EPHTTATVAA IEKEHMFDKV VTPSDVGKLN  120
RLVIPKQHAE KYFPLDSSTN EKGLLLNFED RTGKAWRFRY SYWNSSQSYV MTKGWSRFVK  180
EKKLDAGDIV SFQRGLGESG KDRLYIDWRR RPEAADPNHH HHALHHQHHN FGIPPPHHYS  240
FHRSVPWSPL LMRPPGSSPT IAREHHLQQM NYSTNIHPYR NSSAGGGGGY GYGNVVSMNP  300
VCSGPVYYLR SGGGGGSVIP QQLHQQEGSA TTHAHHHHHH HHHQVGLGQL GRVNVVEPMV  360
LESVPVVHGK VAAAGKRLRL FGVNMDCPVS DQSDECDILS SSTTTAMVLS QQPHQPPLQL  420
RLYDGTPATT TDFFNRGKTS SSSSMSLDFD V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.11e-67B3 family protein