PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004404.1_g000004.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family MYB_related
Protein Properties Length: 346aa    MW: 38642.6 Da    PI: 5.1238
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004404.1_g000004.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding26.71.3e-081663447
                               S-HHHHHHHHHHHHHTTTT......-HHHHHHHHTTTS-HHHHHHHHHHH CS
            Myb_DNA-binding  4 WTteEdellvdavkqlGgg......tWktIartmgkgRtlkqcksrwqky 47
                               WTte+d++l+ avk+   +      +Wk++a  +g  + +  ck+rwq++
  Rmu_sc0004404.1_g000004.1 16 WTTEDDKKLKYAVKKVAARkgghikDWKKVAFIVG--KRGDLCKDRWQNV 63
                               **********************************9..45559******96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MSYAKKLIEM GAGRYWTTED DKKLKYAVKK VAARKGGHIK DWKKVAFIVG KRGDLCKDRW  60
QNVVSPDIKK GAWSKEEDQR LLNASASCDS NMLNTVLDVF NSSSVDGKIR TLHQCQARLQ  120
QLLNGNHSRK LEEKSVEQGN IAGLYQQKAE GVGDEGVADE GVVDEGVAYA QVADALTLLQ  180
NNYNGEEELE IGDGLTNLFK TYAEADAASG IAVHNECKLK FLELKTKRTY RSIVFKIEEK  240
QKQVIVEATG DPTETYEAFT DSLPTDECCY AVFDFDLPIP EGVPKRQILF IAWLPDTSRE  300
ENKKIYASAL DSFKRELDGI QIELEATGPS EIGLDVIRNR AAKHEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32730.11e-07MYB family protein