PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Rmu_sc0004367.1_g000014.1

Organism

Rosa multiflora

Taxonomic ID

74647

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa

Family

bHLH

Protein Properties

Length: 375aa MW: 40911.4 Da PI: 5.0146

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Rmu_sc0004367.1_g000014.1	genome	GDR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	49.6	7e-16	149	195	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn E+rRR+riN+++ L+ l+P++ K +Ka++L +A+eY+k+Lq Rmu_sc0004367.1_g000014.1 149 VHNLSEKRRRSRINEKMKALQNLIPNS-----NKTDKASMLDEAIEYLKQLQ 195 6***********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
MGMGDTYDYN YQNNPCSSSA PASSVSVAQP HSSTDEISLF LQQILVRSSS LSGQPFLFSS 60 SPAGYALPEN LSRPCNDSFV GGGIRGVDVS TAVGTGSGPN VSSSSVGASE NEADEYDCES 120 EEGLEALVEE AAMKSGGRSS SKRSRAAEVH NLSEKRRRSR INEKMKALQN LIPNSNKTDK 180 ASMLDEAIEY LKQLQLQVQM LSMRNGMSLH PMCLPGAPQL SQIRMDFGEE NRPLHLNMSG 240 TLNMNQEPST QNLYNPNQSY VPDMSNVVNS EDAFGLESSI QAHLGPFQLP NSSKGICRDE 300 LFQHQLISVN HSETNPLEFE LGATATVSLP FTAQVSDLKD YSSLETCIIG RDQRESRPSK 360 SIEQHLHLDR KKGPK

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

MGMGDTYDYN YQNNPCSSSA PASSVSVAQP HSSTDEISLF LQQILVRSSS LSGQPFLFSS  60
SPAGYALPEN LSRPCNDSFV GGGIRGVDVS TAVGTGSGPN VSSSSVGASE NEADEYDCES  120
EEGLEALVEE AAMKSGGRSS SKRSRAAEVH NLSEKRRRSR INEKMKALQN LIPNSNKTDK  180
ASMLDEAIEY LKQLQLQVQM LSMRNGMSLH PMCLPGAPQL SQIRMDFGEE NRPLHLNMSG  240
TLNMNQEPST QNLYNPNQSY VPDMSNVVNS EDAFGLESSI QAHLGPFQLP NSSKGICRDE  300
LFQHQLISVN HSETNPLEFE LGATATVSLP FTAQVSDLKD YSSLETCIIG RDQRESRPSK  360
SIEQHLHLDR KKGPK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G36930.1	1e-49	bHLH family protein