PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004342.1_g000003.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family ERF
Protein Properties Length: 267aa    MW: 29683.6 Da    PI: 6.7169
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004342.1_g000003.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP265.31.3e-2092140355
                        AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                                y+G+r+++ +g+W+AeIrdp     +  r++lg+f t+eeAa+a+++a+++++g
  Rmu_sc0004342.1_g000003.1  92 YRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTFNTPEEAARAYDEAARRIRG 140
                                9*******.**********72....35************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MCGGAIISDF TEAKRGWKLT AEGLCFELDT ISDLLGLDSS SNNRQVPHHK LAQKAKVDPN  60
PVTKVSSEIK EKKTSIGVAE DGKTKRVRKN IYRGIRQRPW GKWAAEIRDP HKGVRVWLGT  120
FNTPEEAARA YDEAARRIRG DKAKLNFPPQ PAPVPAPAPA SAQLQPPSKK RCMALEATAP  180
AMMGMEPYYP SFQNEFYCRS ETAADHHECE LKEQISSLES FLGLDESVSS NEVMSGLGIG  240
EPDSVDLWML DDLVTHHQQQ GEHQLVY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.11e-39ERF family protein