PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004322.1_g000008.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family NAC
Protein Properties Length: 446aa    MW: 51012.5 Da    PI: 4.3583
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004322.1_g000008.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM71.42.4e-22151492128
                        NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleev.ikevdiykv.ePwdLpk..kvka.....eekewyfFskrdkkyatgkrknr 76 
                                 pG rF P ++elv +yLk+ ++g++++  +  + ++d+y + ePw++ +  k+k       +k++yfF++++k ++t+kr +r
  Rmu_sc0004322.1_g000008.1  15 LPGQRFCPMEDELVLFYLKPMLSGQNVPGRNRvVFDCDLYGHqEPWEIWEafKTKRphdlrLNKDIYFFTQHKKMSSTDKRVRR 98 
                                59************************8775544999****8879****742422224333334588****************** PP

                        NAM  77 atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                                 + sg+Wk   + k+v s  +g++vglkk  ++ +  + + ++  W++he+ l
  Rmu_sc0004322.1_g000008.1  99 NVGSGTWKGDNSGKPVRSVeTGRAVGLKKRYTYKN--EDSVHNGCWILHEFYL 149
                                ********9999999998768899********984..5555699*******87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 446 aa     Download sequence    
MQQEFSMEES RRNHLPGQRF CPMEDELVLF YLKPMLSGQN VPGRNRVVFD CDLYGHQEPW  60
EIWEAFKTKR PHDLRLNKDI YFFTQHKKMS STDKRVRRNV GSGTWKGDNS GKPVRSVETG  120
RAVGLKKRYT YKNEDSVHNG CWILHEFYLD RSLRDKKQIV KDYVLCRLRK NGEPKTKIEK  180
KESNVKRKRE QEELLEPQAK RQRTVPSIDN APLTMPSEDD AAFAAELEES LECFEDDNAP  240
SEAHAIDFQG EENGGQQPLA ETQAGPSFGD DHGIFNMLPE EDFLCEELLK EMGIEKDEPV  300
LNGESSNIDM AEEKENSTLL YAPTSSMSVA YDGCNDMPYL SSGKGCLDPS GSNNVCGGSI  360
GFQDGAYWVE SLLEVPSTVE QQKTVDEDCS DWLESINFSP EENNLLWSDI STVEQQKTSD  420
EDCSDWLESI NFSPEENNLL WSDMQW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77450.13e-16NAC family protein