PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Rmu_sc0004189.1_g000026.1
Organism
Rosa multiflora
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
Family TCP
Protein Properties Length: 91aa    MW: 10282.5 Da    PI: 11.1184
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Rmu_sc0004189.1_g000026.1genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP76.38.8e-243684250
                        TCP  2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieW 50
                               +g kd+hsk++T +g+RdR++Rl+a++a++f+d+qd+LG+d++sk ++W
  Rmu_sc0004189.1_g000026.1 36 TGLKDSHSKVCTTKGPRDRSIRLVAHTAIQFYDMQDRLGYDQPSKVVDW 84
                               6779********************************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    
MTNFRNGSVT EIGRRTTSSS TASEIVEAQG NILRATGLKD SHSKVCTTKG PRDRSIRLVA  60
HTAIQFYDMQ DRLGYDQPSK VVDWPRRTRR T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31070.15e-29TCP family protein