PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003927.1_g000001.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | HSF | ||||||||
Protein Properties | Length: 127aa MW: 14566.5 Da PI: 6.5181 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 80.6 | 2.4e-25 | 45 | 103 | 2 | 60 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHT CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmY 60 Fl+k+y++++d+++++++sws+ g sfvv+d+++f ++Lp+yFkh+nf+SFvRQLn+Y Rmu_sc0003927.1_g000001.1 45 FLNKTYDMVDDPSTNRIVSWSRGGGSFVVWDPHSFVMNLLPRYFKHNNFSSFVRQLNTY 103 9********************************************************** PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence |
MNYLYPVKEE YPGGSSSSQW SGDPLMTVAP PQPMEGLNDT GPPPFLNKTY DMVDDPSTNR 60 IVSWSRGGGS FVVWDPHSFV MNLLPRYFKH NNFSSFVRQL NTYVSVFTPQ SSNWLVEIFF 120 FRKVQMV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G63350.1 | 1e-37 | HSF family protein |