PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Rmu_sc0003859.1_g000032.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Rosoideae; Rosoideae incertae sedis; Rosa
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Family | WOX | ||||||||
Protein Properties | Length: 196aa MW: 21630.2 Da PI: 8.0976 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 51.8 | 1.4e-16 | 31 | 90 | 3 | 56 |
--SS--HHHHHHHHHHHHH..SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFek..nrypsaeereeLAkkl....gLterqVkvWFqNrRakek 56 +R+ +t++q+++L+el+ + p+ e+ ++++ +l +++ ++V++WFqN+Ra+ek Rmu_sc0003859.1_g000032.1 31 TRWLPTTDQIRILKELYDDkgVKSPTVEQVQRITLQLkwyrQIENNNVFYWFQNQRAREK 90 7*****************6579*************************************9 PP | |||||||
2 | Wus_type_Homeobox | 89.4 | 3.6e-29 | 30 | 93 | 3 | 65 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyk.sGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqkq 65 +tRW Pt++Qi+iL+ely+ +G+++P+ e++qrit +L+ y +ie++NVfyWFQN++aRe+ k+ Rmu_sc0003859.1_g000032.1 30 NTRWLPTTDQIRILKELYDdKGVKSPTVEQVQRITLQLKWYRQIENNNVFYWFQNQRAREKLKK 93 79****************999****************************************885 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 196 aa Download sequence |
MEPQNRHPTE DGGSNKAAES SPNMHCKQCN TRWLPTTDQI RILKELYDDK GVKSPTVEQV 60 QRITLQLKWY RQIENNNVFY WFQNQRAREK LKKKNLTSDV QVPKQRLGLV GGSINLNFGS 120 TSSADVGGSI MEQRGEDHQE VKTLPLFPMH SEDIFGNMKT TSDGGGGHGG SSHISLELSL 180 SCEGKAGKVS GAADSA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17950.1 | 9e-26 | WOX family protein |